EnhancerDB
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  3. rs572246198[chr1:181065833]
Enhancers that have rs572246198[chr1:181065833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572246198[chr1:181065833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181065523 181065859 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21354316
chr1 181065523 181065859 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107848286
chr1 181065556 181065852 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21354317
chr1 181065556 181065852 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107848287
chr1 181065825 181065836 GATA1 TRANSFAC yes 33552031
chr1 181065825 181065839 JUN JASPAR yes 33552032
chr1 181065827 181065838 BATF JASPAR yes 33552033
chr1 181065829 181065840 FOS JASPAR yes 33552034
chr1 181065829 181065840 JUND JASPAR yes 33552035
chr1 181065830 181065841 JUNB JASPAR yes 33552036
chr1 181065831 181065837 JUN TRANSFAC yes 33552037
Genes associated with rs572246198[chr1:181065833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More