EnhancerDB
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  3. rs572417695[chr1:16122826]
Enhancers that have rs572417695[chr1:16122826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572417695[chr1:16122826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16122816 16122831 FOXP1 JASPAR yes 27002322
chr1 16122817 16122838 IRF1 JASPAR yes 27002323
chr1 16122818 16122830 FOXC2 JASPAR yes 27002324
chr1 16122818 16122838 RREB1 JASPAR yes 27002325
chr1 16122819 16122830 FOXP2 JASPAR yes 27002326
chr1 16122823 16122838 FOXP1 JASPAR yes 27002327
chr1 16122823 16122843 RREB1 JASPAR yes 27002328
chr1 16122823 16122844 IRF1 JASPAR yes 27002329
chr1 16122824 16122845 IRF1 JASPAR yes 27002330
chr1 16122825 16122845 RREB1 JASPAR yes 27002331
Genes associated with rs572417695[chr1:16122826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More