EnhancerDB
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  3. rs572420053[chr12:65050791]
Enhancers that have rs572420053[chr12:65050791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572420053[chr12:65050791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65050781 65050802 IRF1 JASPAR yes 121421930
chr12 65050783 65050798 PRDM1 JASPAR yes 121421931
chr12 65050783 65050798 STAT2 JASPAR yes 121421932
chr12 65050784 65050798 STAT1 JASPAR yes 121421933
chr12 65050785 65050800 IRF9 JASPAR yes 121421934
chr12 65050785 65050806 IRF1 JASPAR yes 121421935
chr12 65050786 65050801 FOXP1 JASPAR yes 121421936
chr12 65050786 65050807 IRF1 JASPAR yes 121421937
chr12 65050787 65050808 IRF1 JASPAR yes 121421938
chr12 65050788 65050803 FOXP1 JASPAR yes 121421939
chr12 65050790 65050805 FOXP1 JASPAR yes 121421940
chr12 65050791 65050806 FOXP1 JASPAR yes 121421941
Genes associated with rs572420053[chr12:65050791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More