EnhancerDB
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  3. rs572434954[chr1:235118870]
Enhancers that have rs572434954[chr1:235118870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572434954[chr1:235118870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235118843 235119714 ZNF274 GTRD no Bone Marrow (K562) 21402601
chr1 235118855 235118870 FOXP1 JASPAR yes 36338146
chr1 235118855 235118876 IRF1 JASPAR yes 36338147
chr1 235118856 235118871 FOXP1 JASPAR yes 36338148
chr1 235118856 235118877 IRF1 JASPAR yes 36338149
chr1 235118857 235118872 FOXP1 JASPAR yes 36338150
chr1 235118868 235118889 IRF1 JASPAR yes 36338151
Genes associated with rs572434954[chr1:235118870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More