EnhancerDB
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  3. rs572481822[chr6:88423211]
Enhancers that have rs572481822[chr6:88423211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572481822[chr6:88423211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88423208 88423225 RXRA JASPAR yes 103323288
chr6 88423211 88423225 RXRB JASPAR yes 103323289
chr6 88423211 88423225 RXRG JASPAR yes 103323290
Genes associated with rs572481822[chr6:88423211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More