EnhancerDB
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  3. rs572516852[chr8:125671498]
Enhancers that have rs572516852[chr8:125671498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 125659365 125706835 enh25279
Bone Marrow (K562) Brain (SK-N-MC) Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572516852[chr8:125671498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 125671486 125671501 HNF1A JASPAR yes 48127688
chr8 125671487 125671500 HNF1B JASPAR yes 48127689
chr8 125671487 125671501 POU4F1 JASPAR yes 48127690
chr8 125671487 125671503 POU4F2 JASPAR yes 48127691
chr8 125671487 125671503 POU4F3 JASPAR yes 48127692
chr8 125671490 125671500 GSX2 JASPAR yes 48127693
chr8 125671490 125671500 HOXB2 JASPAR yes 48127694
chr8 125671490 125671500 HOXB3 JASPAR yes 48127695
chr8 125671490 125671500 MNX1 JASPAR yes 48127696
chr8 125671490 125671500 POU6F1 JASPAR yes 48127697
chr8 125671490 125671501 HOXA10 JASPAR yes 48127698
chr8 125671491 125671499 LMX1A JASPAR yes 48127699
chr8 125671491 125671499 LMX1B JASPAR yes 48127700
chr8 125671491 125671499 NKX6-1 JASPAR yes 48127701
chr8 125671491 125671499 NKX6-2 JASPAR yes 48127702
chr8 125671491 125671499 VAX1 JASPAR yes 48127703
chr8 125671491 125671499 VAX2 JASPAR yes 48127704
chr8 125671491 125671499 VSX1 JASPAR yes 48127705
chr8 125671491 125671499 VSX2 JASPAR yes 48127706
chr8 125671491 125671505 POU4F1 JASPAR yes 48127707
chr8 125671491 125671507 POU4F2 JASPAR yes 48127708
chr8 125671491 125671507 POU4F3 JASPAR yes 48127709
chr8 125671492 125671503 PHOX2A JASPAR yes 48127710
chr8 125671492 125671503 PROP1 JASPAR yes 48127711
chr8 125671493 125671507 POU4F1 JASPAR yes 48127712
chr8 125671493 125671508 HNF1A JASPAR yes 48127713
chr8 125671494 125671506 HNF1B JASPAR yes 48127714
chr8 125671497 125671512 MEF2A JASPAR yes 48127715
chr8 125671498 125671510 MEF2A JASPAR yes 48127716
chr8 125671498 125671510 MEF2B JASPAR yes 48127717
chr8 125671498 125671510 MEF2D JASPAR yes 48127718
Genes associated with rs572516852[chr8:125671498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More