EnhancerDB
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  3. rs572546490[chr17:42176561]
Enhancers that have rs572546490[chr17:42176561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572546490[chr17:42176561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42176556 42176565 ZEB1 JASPAR yes 54386917
chr17 42176559 42176564 USF2 TRANSFAC yes 54386918
chr17 42176559 42176576 BCL6B JASPAR yes 54386919
Genes associated with rs572546490[chr17:42176561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More