EnhancerDB
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  3. rs572547609[chr12:125189320]
Enhancers that have rs572547609[chr12:125189320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572547609[chr12:125189320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125189303 125189321 NFYA JASPAR yes 124411153
chr12 125189306 125189322 NFYA JASPAR yes 124411154
chr12 125189309 125189324 NFYB JASPAR yes 124411156
chr12 125189320 125189324 LFA1 TRANSFAC yes 124411157
Genes associated with rs572547609[chr12:125189320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More