EnhancerDB
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  3. rs572552890[chr16:23508276]
Enhancers that have rs572552890[chr16:23508276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 23505651 23520195 enh3944
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572552890[chr16:23508276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 23507833 23511120 ZNF274 GTRD no Liver (HepG2) 21697918
chr16 23507833 23511120 ZNF274 GTRD no Liver (HepG2) 108188611
chr16 23507875 23511195 ZNF274 GTRD no Blood (GM12878) 21697919
chr16 23507875 23511195 ZNF274 GTRD no Blood (GM12878) 108188612
chr16 23507890 23511150 ZNF274 GTRD no Bone Marrow (K562) 108188613
chr16 23507993 23511109 ZNF274 GTRD no Blood (GM12878) 21697920
chr16 23507993 23511109 ZNF274 GTRD no Blood (GM12878) 108188614
chr16 23508018 23511029 ZNF274 GTRD no Blood (GM12878) 21697921
chr16 23508018 23511029 ZNF274 GTRD no Blood (GM12878) 108188615
chr16 23508026 23509937 ZNF274 GTRD no Blood (GM12878) 21697922
chr16 23508026 23509937 ZNF274 GTRD no Blood (GM12878) 108188616
chr16 23508086 23509619 ZNF274 GTRD no Blood (GM12878) 21697923
chr16 23508086 23509619 ZNF274 GTRD no Blood (GM12878) 108188617
chr16 23508122 23511146 ZNF274 GTRD no Liver (HepG2) 21697924
chr16 23508122 23511146 ZNF274 GTRD no Liver (HepG2) 108188618
chr16 23508163 23510067 ZNF274 GTRD no Blood (GM12878) 21697925
chr16 23508163 23510067 ZNF274 GTRD no Blood (GM12878) 108188619
chr16 23508170 23508915 ZNF274 GTRD no Bone Marrow (K562) 108188620
chr16 23508195 23511124 ZNF274 GTRD no Bone Marrow (K562) 108188621
chr16 23508200 23511164 ZNF274 GTRD no Liver (HepG2) 21697926
chr16 23508200 23511164 ZNF274 GTRD no Liver (HepG2) 108188622
chr16 23508221 23511246 ZNF274 GTRD no Bone Marrow (K562) 108188623
chr16 23508271 23508286 MEF2C JASPAR yes 10006607
chr16 23508272 23508287 MEF2A JASPAR yes 10006608
chr16 23508274 23508289 FOXP1 JASPAR yes 10006609
chr16 23508275 23508281 TBP TRANSFAC yes 10006610
chr16 23508275 23508290 FOXP1 JASPAR yes 10006611
chr16 23508276 23508291 FOXP1 JASPAR yes 10006612
chr16 23508276 23508297 IRF1 JASPAR yes 10006613
Genes associated with rs572552890[chr16:23508276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More