EnhancerDB
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  3. rs572562007[chr1:235143644]
Enhancers that have rs572562007[chr1:235143644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs572562007[chr1:235143644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235143527 235144255 ZNF274 GTRD no Cervix (HeLa-S3) 21402933
chr1 235143633 235143648 FOXP1 JASPAR yes 36341517
chr1 235143634 235143655 IRF1 JASPAR yes 36341518
chr1 235143636 235143647 FOXP2 JASPAR yes 36341520
chr1 235143636 235143651 IRF9 JASPAR yes 36341521
chr1 235143638 235143653 STAT2 JASPAR yes 36341522
Genes associated with rs572562007[chr1:235143644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More