EnhancerDB
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  3. rs572568816[chr5:77813542]
Enhancers that have rs572568816[chr5:77813542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572568816[chr5:77813542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77813533 77813547 ZIC1 JASPAR yes 63595506
chr5 77813533 77813548 ZIC3 JASPAR yes 63595507
chr5 77813533 77813548 ZIC4 JASPAR yes 63595508
chr5 77813535 77813551 NFYA JASPAR yes 63595509
chr5 77813537 77813551 PLAG1 JASPAR yes 63595510
Genes associated with rs572568816[chr5:77813542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More