EnhancerDB
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  3. rs572571496[chr17:55993181]
Enhancers that have rs572571496[chr17:55993181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55992933 55993227 vista25265
VISTA
Transcript factors that have rs572571496[chr17:55993181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55992667 55993458 ZNF143 GTRD no Epithelial (MCF-7) 21773861
chr17 55992667 55993458 ZNF143 GTRD no Epithelial (MCF-7) 108274755
chr17 55992676 55993377 ZNF143 GTRD no Epithelial (MCF-7) 21773862
chr17 55992676 55993377 ZNF143 GTRD no Epithelial (MCF-7) 108274756
chr17 55993171 55993192 ZNF263 JASPAR yes 21261243
chr17 55993171 55993192 ZNF263 JASPAR yes 54998753
chr17 55993175 55993185 SP1 JASPAR yes 21261244
chr17 55993175 55993185 SP1 JASPAR yes 54998754
chr17 55993176 55993186 SP1 JASPAR yes 21261245
chr17 55993176 55993186 SP1 JASPAR yes 54998755
chr17 55993177 55993182 SP1 TRANSFAC yes 21261246
chr17 55993177 55993182 SP1 TRANSFAC yes 54998756
chr17 55993177 55993188 E2F4 JASPAR yes 21261247
chr17 55993177 55993188 E2F4 JASPAR yes 54998757
chr17 55993178 55993183 SP1 TRANSFAC yes 21261248
chr17 55993178 55993183 SP1 TRANSFAC yes 54998758
chr17 55993178 55993184 SP1 TRANSFAC yes 21261249
chr17 55993178 55993184 SP1 TRANSFAC yes 54998759
Genes associated with rs572571496[chr17:55993181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More