EnhancerDB
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  3. rs572582289[chr2:232554421]
Enhancers that have rs572582289[chr2:232554421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572582289[chr2:232554421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232554411 232554422 ESRRA JASPAR yes 81737014
chr2 232554411 232554422 ESRRB JASPAR yes 81737015
chr2 232554411 232554424 NR2F1 JASPAR yes 81737016
chr2 232554415 232554426 USF1 JASPAR yes 81737018
chr2 232554416 232554426 TFE3 JASPAR yes 81737019
chr2 232554416 232554426 TFEB JASPAR yes 81737020
chr2 232554416 232554426 TFEC JASPAR yes 81737021
Genes associated with rs572582289[chr2:232554421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More