EnhancerDB
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  3. rs572666039[chr17:28046996]
Enhancers that have rs572666039[chr17:28046996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572666039[chr17:28046996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28046984 28046996 GLI2 JASPAR yes 53753192
chr17 28046992 28047010 RARA JASPAR yes 53753193
Genes associated with rs572666039[chr17:28046996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More