EnhancerDB
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  3. rs572709081[chr1:8201040]
Enhancers that have rs572709081[chr1:8201040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs572709081[chr1:8201040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8201031 8201044 SMAD2 JASPAR yes 26518710
chr1 8201039 8201049 ID4 JASPAR yes 26518711
chr1 8201039 8201049 TCF3 JASPAR yes 26518712
chr1 8201039 8201049 TCF4 JASPAR yes 26518713
chr1 8201040 8201049 SNAI2 JASPAR yes 26518714
Genes associated with rs572709081[chr1:8201040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More