EnhancerDB
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  3. rs572729160[chr12:52509105]
Enhancers that have rs572729160[chr12:52509105]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs572729160[chr12:52509105]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52506752 52509206 AR GTRD no Prostate (PC-3) 21546105
chr12 52509101 52509115 TCF7L2 JASPAR yes 120918002
chr12 52509101 52509116 LEF1 JASPAR yes 120918003
chr12 52509104 52509118 GLIS3 JASPAR yes 120918004
Genes associated with rs572729160[chr12:52509105], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More