EnhancerDB
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  3. rs572733845[chr17:48954830]
Enhancers that have rs572733845[chr17:48954830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs572733845[chr17:48954830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48953728 48954893 ZNF274 GTRD no Bone Marrow (K562) 21770037
chr17 48953754 48954996 ZNF143 GTRD no Epithelial (MCF-7) 21770038
chr17 48953811 48954927 ZNF274 GTRD no Cervix (HeLa-S3) 21770039
chr17 48953819 48955016 ZNF143 GTRD no Epithelial (MCF-7) 21770040
chr17 48953851 48954996 ZNF143 GTRD no Epithelial (MCF-7) 21770041
chr17 48953859 48954952 ZNF143 GTRD no Epithelial (MCF-7) 21770042
chr17 48953897 48955125 ZNF274 GTRD no Liver (HepG2) 21770044
chr17 48953907 48954880 ZNF274 GTRD no Liver (HepG2) 21770045
chr17 48953909 48954877 ZNF274 GTRD no Liver (HepG2) 21770046
chr17 48953914 48955136 ZNF143 GTRD no Epithelial (MCF-7) 21770047
chr17 48953920 48954842 ZNF143 GTRD no Epithelial (MCF-7) 21770048
chr17 48953921 48955083 ZNF274 GTRD no Liver (HepG2) 21770049
chr17 48953929 48954830 ZNF274 GTRD no Liver (HepG2) 21770050
chr17 48953954 48954901 ZNF274 GTRD no Liver (HepG2) 21770052
chr17 48953962 48954978 ZNF274 GTRD no Liver (HepG2) 21770053
chr17 48953969 48955084 ZNF143 GTRD no Epithelial (MCF-7) 21770054
chr17 48953995 48954956 ZNF143 GTRD no Epithelial (MCF-7) 21770055
chr17 48954019 48954967 ZNF274 GTRD no Bone Marrow (K562) 21770057
chr17 48954080 48954840 ZNF274 GTRD no Bone Marrow (K562) 21770062
chr17 48954116 48954971 ZNF274 GTRD no Liver (HepG2) 21770066
chr17 48954126 48954926 ZNF274 GTRD no Liver (HepG2) 21770069
chr17 48954132 48954968 ZNF274 GTRD no Bone Marrow (K562) 21770070
chr17 48954267 48955125 ZNF143 GTRD no Epithelial (MCF-7) 21770100
chr17 48954288 48954904 ZNF143 GTRD no Epithelial (MCF-7) 21770105
chr17 48954301 48954997 ZNF274 GTRD no Liver (HepG2) 21770107
chr17 48954332 48954857 ZNF274 GTRD no Liver (HepG2) 21770113
chr17 48954825 48954831 ZNF354C JASPAR yes 54727574
chr17 48954826 48954836 ID4 JASPAR yes 54727575
chr17 48954827 48954836 SNAI2 JASPAR yes 54727576
chr17 48954828 48954833 USF2 TRANSFAC yes 54727577
Genes associated with rs572733845[chr17:48954830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More