EnhancerDB
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  3. rs572787364[chr17:80494333]
Enhancers that have rs572787364[chr17:80494333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572787364[chr17:80494333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 21800723
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 108312679
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 21800724
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 108312680
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 21800725
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 108312681
chr17 80493974 80494892 ZNF274 GTRD no Cervix (HeLa-S3) 21800727
chr17 80493974 80494892 ZNF274 GTRD no Cervix (HeLa-S3) 108312683
chr17 80494012 80494456 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21800728
chr17 80494012 80494456 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108312684
chr17 80494014 80494370 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21800729
chr17 80494014 80494370 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108312685
chr17 80494043 80494454 ZNF274 GTRD no Liver (HepG2) 21800730
chr17 80494043 80494454 ZNF274 GTRD no Liver (HepG2) 108312686
chr17 80494160 80494834 ZBTB33 GTRD no Lung (A549) 21800731
chr17 80494160 80494834 ZBTB33 GTRD no Lung (A549) 108312687
chr17 80494214 80494950 ZNF274 GTRD no Bone Marrow (K562) 21800732
chr17 80494214 80494950 ZNF274 GTRD no Bone Marrow (K562) 108312688
chr17 80494315 80494333 E2F3 JASPAR yes 56371740
chr17 80494331 80494335 YY1 TRANSFAC yes 56371743
chr17 80494332 80494342 HOXC10 JASPAR yes 56371744
chr17 80494332 80494342 HOXD11 JASPAR yes 56371745
chr17 80494332 80494343 HOXC11 JASPAR yes 56371746
chr17 80494332 80494343 HOXC12 JASPAR yes 56371747
chr17 80494332 80494343 HOXD12 JASPAR yes 56371748
Genes associated with rs572787364[chr17:80494333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More