EnhancerDB
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  3. rs572790806[chr2:227511454]
Enhancers that have rs572790806[chr2:227511454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572790806[chr2:227511454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227511443 227511458 ZIC4 JASPAR yes 81478105
chr2 227511444 227511458 ZIC1 JASPAR yes 81478106
chr2 227511451 227511456 SP1 TRANSFAC yes 81478107
chr2 227511454 227511464 NKX2-3 JASPAR yes 81478108
Genes associated with rs572790806[chr2:227511454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More