EnhancerDB
  1. Home
  2. SNP
  3. rs572871062[chr1:167770352]
Enhancers that have rs572871062[chr1:167770352]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572871062[chr1:167770352]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167770153 167770810 SOX2 GTRD no Neural Stem Cells (H9) 21347306
chr1 167770167 167770513 SOX2 GTRD no Neural Stem Cells (H9) 21347307
chr1 167770253 167770619 SOX2 GTRD no Neural Stem Cells (H9) 21347308
chr1 167770338 167770353 AR JASPAR yes 32894633
Genes associated with rs572871062[chr1:167770352], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More