EnhancerDB
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  3. rs572877918[chr17:48969874]
Enhancers that have rs572877918[chr17:48969874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs572877918[chr17:48969874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48969365 48969961 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21770305
chr17 48969530 48969986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770306
chr17 48969611 48971268 AR GTRD no Prostate (PC-3) 21770307
chr17 48969695 48970056 ZNF274 GTRD no Bone Marrow (K562) 21770308
chr17 48969695 48970122 ZNF274 GTRD no Liver (HepG2) 21770309
chr17 48969781 48970029 ZNF143 GTRD no Epithelial (MCF-7) 21770310
chr17 48969791 48970964 ZNF274 GTRD no Bone Marrow (K562) 21770311
chr17 48969801 48970075 ZNF274 GTRD no Liver (HepG2) 21770312
chr17 48969807 48971160 ZNF274 GTRD no Bone Marrow (K562) 21770313
chr17 48969871 48969883 PROX1 JASPAR yes 54730014
Genes associated with rs572877918[chr17:48969874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More