EnhancerDB
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  3. rs572892829[chr11:122545087]
Enhancers that have rs572892829[chr11:122545087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572892829[chr11:122545087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122545079 122545100 IRF1 JASPAR yes 42017607
chr11 122545081 122545102 IRF1 JASPAR yes 42017608
chr11 122545082 122545097 FOXP1 JASPAR yes 42017610
chr11 122545082 122545103 IRF1 JASPAR yes 42017611
chr11 122545083 122545104 IRF1 JASPAR yes 42017612
chr11 122545084 122545099 FOXP1 JASPAR yes 42017613
chr11 122545084 122545105 IRF1 JASPAR yes 42017614
chr11 122545085 122545106 IRF1 JASPAR yes 42017615
chr11 122545086 122545101 FOXP1 JASPAR yes 42017616
chr11 122545086 122545107 IRF1 JASPAR yes 42017617
chr11 122545087 122545102 FOXP1 JASPAR yes 42017618
Genes associated with rs572892829[chr11:122545087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More