EnhancerDB
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  3. rs572915542[chr1:182062346]
Enhancers that have rs572915542[chr1:182062346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs572915542[chr1:182062346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182061394 182062424 ZNF143 GTRD no Epithelial (MCF-7) 21356921
chr1 182062228 182062641 ZNF274 GTRD no Liver (HepG2) 21356934
chr1 182062333 182062352 RFX2 JASPAR yes 33589281
chr1 182062335 182062350 RFX5 JASPAR yes 33589282
chr1 182062341 182062353 ZBTB7A JASPAR yes 33589283
chr1 182062342 182062357 RUNX2 JASPAR yes 33589284
chr1 182062343 182062352 RUNX2 JASPAR yes 33589285
chr1 182062343 182062353 RUNX3 JASPAR yes 33589286
chr1 182062343 182062354 RUNX1 JASPAR yes 33589287
Genes associated with rs572915542[chr1:182062346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More