EnhancerDB
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  3. rs572920338[chr17:73858396]
Enhancers that have rs572920338[chr17:73858396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73855485 73871095 enh17381
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs572920338[chr17:73858396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73858380 73858396 SOX4 JASPAR yes 55972900
chr17 73858386 73858398 PBX1 JASPAR yes 55972902
chr17 73858387 73858407 RREB1 JASPAR yes 55972903
chr17 73858388 73858408 RREB1 JASPAR yes 55972904
chr17 73858390 73858399 SRY JASPAR yes 55972905
chr17 73858391 73858411 RREB1 JASPAR yes 55972906
chr17 73858392 73858412 RREB1 JASPAR yes 55972907
chr17 73858395 73858401 TCF4 TRANSFAC yes 55972908
chr17 73858395 73858407 FOXI1 JASPAR yes 55972909
chr17 73858395 73858410 FOXP1 JASPAR yes 55972910
chr17 73858395 73858415 RREB1 JASPAR yes 55972911
chr17 73858396 73858416 RREB1 JASPAR yes 55972912
Genes associated with rs572920338[chr17:73858396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More