EnhancerDB
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  3. rs572929440[chr16:85222426]
Enhancers that have rs572929440[chr16:85222426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572929440[chr16:85222426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85220916 85222563 TCF7L2 GTRD no Colon (HCT116) 21720633
chr16 85220928 85222615 ZNF143 GTRD no Epithelial (MCF-7) 21720634
chr16 85220936 85222669 ZNF274 GTRD no Liver (HepG2) 21720635
chr16 85221459 85222512 TCF7L2 GTRD no Colon (HCT116) 21720654
chr16 85221475 85222567 TCF7L2 GTRD no Colon (HCT116) 21720656
chr16 85221480 85222738 ZNF274 GTRD no Bone Marrow (K562) 21720657
chr16 85221489 85222625 TCF7L2 GTRD no Colon (HCT116) 21720658
chr16 85221603 85222450 ZNF274 GTRD no Liver (HepG2) 21720659
chr16 85221734 85222778 ZNF274 GTRD no Liver (HepG2) 21720661
chr16 85221750 85222522 ZNF274 GTRD no Liver (HepG2) 21720662
chr16 85221875 85222442 ZNF274 GTRD no Liver (HepG2) 21720665
chr16 85221943 85222513 ZNF274 GTRD no Liver (HepG2) 21720666
chr16 85222062 85222481 ZNF274 GTRD no Liver (HepG2) 21720667
chr16 85222104 85222705 ZNF274 GTRD no Blood (GM12878) 21720668
chr16 85222117 85222681 ZNF274 GTRD no Blood (GM12878) 21720669
chr16 85222148 85222817 ZNF274 GTRD no Liver (HepG2) 21720670
chr16 85222259 85223447 ZNF274 GTRD no Blood (GM12878) 21720671
chr16 85222307 85222817 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21720672
chr16 85222385 85222909 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21720673
chr16 85222410 85222431 IRF1 JASPAR yes 12030138
chr16 85222411 85222426 FOXP1 JASPAR yes 12030140
chr16 85222411 85222432 IRF1 JASPAR yes 12030141
chr16 85222412 85222427 FOXP1 JASPAR yes 12030142
chr16 85222414 85222429 FOXP1 JASPAR yes 12030143
chr16 85222415 85222430 STAT2 JASPAR yes 12030144
chr16 85222416 85222431 FOXP1 JASPAR yes 12030145
chr16 85222416 85222437 IRF1 JASPAR yes 12030146
chr16 85222418 85222430 FOXC2 JASPAR yes 12030147
chr16 85222418 85222438 RREB1 JASPAR yes 12030148
chr16 85222419 85222430 FOXP2 JASPAR yes 12030149
chr16 85222420 85222435 STAT2 JASPAR yes 12030150
chr16 85222421 85222433 IRF1 JASPAR yes 12030151
chr16 85222421 85222436 FOXP1 JASPAR yes 12030152
chr16 85222422 85222443 IRF1 JASPAR yes 12030153
chr16 85222423 85222443 RREB1 JASPAR yes 12030154
Genes associated with rs572929440[chr16:85222426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More