EnhancerDB
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  3. rs572953959[chr1:173380598]
Enhancers that have rs572953959[chr1:173380598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs572953959[chr1:173380598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173380589 173380599 TEAD1 JASPAR yes 33196808
chr1 173380589 173380599 TEAD4 JASPAR yes 33196809
chr1 173380598 173380612 BATF3 JASPAR yes 33196810
Genes associated with rs572953959[chr1:173380598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More