EnhancerDB
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  3. rs57308939[chr17:41482787]
Enhancers that have rs57308939[chr17:41482787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs57308939[chr17:41482787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41482776 41482791 HNF1A JASPAR yes 54342640
chr17 41482782 41482792 HOXA13 JASPAR yes 54342641
chr17 41482783 41482787 YY1 TRANSFAC yes 54342642
chr17 41482783 41482804 IRF1 JASPAR yes 54342643
chr17 41482784 41482799 FOXP1 JASPAR yes 54342644
chr17 41482785 41482806 IRF1 JASPAR yes 54342645
chr17 41482786 41482792 TBP TRANSFAC yes 54342646
Genes associated with rs57308939[chr17:41482787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More