EnhancerDB
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  3. rs573329998[chr12:52611457]
Enhancers that have rs573329998[chr12:52611457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs573329998[chr12:52611457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52610941 52611517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546820
chr12 52610959 52611475 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546822
chr12 52610981 52611511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546824
chr12 52611039 52611609 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546830
chr12 52611452 52611458 SOX10 JASPAR yes 120929408
chr12 52611454 52611472 NR3C1 JASPAR yes 120929409
chr12 52611457 52611472 STAT2 JASPAR yes 120929410
Genes associated with rs573329998[chr12:52611457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More