EnhancerDB
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  3. rs573478713[chr16:85237057]
Enhancers that have rs573478713[chr16:85237057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573478713[chr16:85237057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85230964 85237139 ZNF274 GTRD no Blood (GM12878) 21720857
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85233505 85237815 TCF7L2 GTRD no Colon (HCT116) 21720908
chr16 85233641 85237669 TCF7L2 GTRD no Colon (HCT116) 21720914
chr16 85234078 85238980 TCF7L2 GTRD no Colon (HCT116) 21720936
chr16 85234998 85237199 ZNF274 GTRD no Blood (GM12878) 21721015
chr16 85235015 85237146 ZNF274 GTRD no Blood (GM12878) 21721017
chr16 85235115 85237065 ZNF274 GTRD no Blood (GM12878) 21721023
chr16 85235850 85237096 ZNF274 GTRD no Blood (GM12878) 21721067
chr16 85236054 85237861 TCF7L2 GTRD no Colon (HCT116) 21721075
chr16 85236069 85237120 ZNF274 GTRD no Blood (GM12878) 21721079
chr16 85236090 85237195 ZNF274 GTRD no Blood (GM12878) 21721083
chr16 85236176 85237683 TCF7L2 GTRD no Colon (HCT116) 21721088
chr16 85236193 85237150 ZNF274 GTRD no Bone Marrow (K562) 21721089
chr16 85236214 85237235 ZNF274 GTRD no Cervix (HeLa-S3) 21721091
chr16 85236342 85237085 ZNF274 GTRD no Liver (HepG2) 21721095
chr16 85236505 85237297 ZNF274 GTRD no Bone Marrow (K562) 21721099
chr16 85236654 85237419 TCF7L2 GTRD no Colon (HCT116) 21721100
chr16 85236714 85237267 TCF7L2 GTRD no Colon (HCT116) 21721101
chr16 85237051 85237064 TFAP2A JASPAR yes 12032073
chr16 85237053 85237067 PLAG1 JASPAR yes 12032074
Genes associated with rs573478713[chr16:85237057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More