EnhancerDB
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  3. rs573600488[chr1:8275233]
Enhancers that have rs573600488[chr1:8275233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573600488[chr1:8275233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8275214 8275233 RFX2 JASPAR yes 26528606
chr1 8275218 8275234 RFX2 JASPAR yes 26528607
chr1 8275218 8275234 RFX3 JASPAR yes 26528608
chr1 8275218 8275234 RFX4 JASPAR yes 26528609
chr1 8275218 8275234 RFX5 JASPAR yes 26528610
chr1 8275222 8275234 POU2F1 JASPAR yes 26528612
chr1 8275222 8275235 POU3F3 JASPAR yes 26528613
chr1 8275222 8275236 POU1F1 JASPAR yes 26528614
chr1 8275224 8275233 POU3F4 JASPAR yes 26528615
chr1 8275224 8275233 POU5F1B JASPAR yes 26528616
chr1 8275224 8275234 NFATC3 JASPAR yes 26528617
chr1 8275224 8275235 FOXB1 JASPAR yes 26528618
chr1 8275226 8275241 FOXP1 JASPAR yes 26528619
chr1 8275232 8275238 TBP TRANSFAC yes 26528620
Genes associated with rs573600488[chr1:8275233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More