EnhancerDB
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  3. rs573641771[chr12:65055464]
Enhancers that have rs573641771[chr12:65055464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573641771[chr12:65055464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65055445 65055466 IRF1 JASPAR yes 121422587
chr12 65055446 65055467 IRF1 JASPAR yes 121422589
chr12 65055447 65055468 IRF1 JASPAR yes 121422591
chr12 65055451 65055472 IRF1 JASPAR yes 121422592
chr12 65055452 65055467 FOXP1 JASPAR yes 121422593
chr12 65055452 65055473 IRF1 JASPAR yes 121422594
chr12 65055453 65055474 IRF1 JASPAR yes 121422595
chr12 65055454 65055469 FOXP1 JASPAR yes 121422596
chr12 65055454 65055475 IRF1 JASPAR yes 121422597
chr12 65055455 65055476 IRF1 JASPAR yes 121422598
chr12 65055456 65055471 FOXP1 JASPAR yes 121422599
chr12 65055456 65055477 IRF1 JASPAR yes 121422600
chr12 65055457 65055472 FOXP1 JASPAR yes 121422601
chr12 65055457 65055478 IRF1 JASPAR yes 121422602
chr12 65055458 65055473 FOXP1 JASPAR yes 121422603
chr12 65055458 65055479 IRF1 JASPAR yes 121422604
chr12 65055459 65055474 FOXP1 JASPAR yes 121422605
chr12 65055459 65055480 IRF1 JASPAR yes 121422606
chr12 65055460 65055475 FOXP1 JASPAR yes 121422607
chr12 65055460 65055481 IRF1 JASPAR yes 121422608
chr12 65055461 65055476 FOXP1 JASPAR yes 121422609
chr12 65055462 65055477 FOXP1 JASPAR yes 121422610
chr12 65055463 65055478 FOXP1 JASPAR yes 121422611
chr12 65055464 65055479 FOXP1 JASPAR yes 121422612
Genes associated with rs573641771[chr12:65055464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More