EnhancerDB
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  3. rs573848885[chr2:240190118]
Enhancers that have rs573848885[chr2:240190118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573848885[chr2:240190118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240189642 240190499 E2F1 UCSC Txn Factor no Conserved 108436009
chr2 240189845 240190341 GATA3 UCSC Txn Factor no Conserved 108436010
chr2 240190115 240190126 FOXA1 JASPAR yes 82223721
chr2 240190115 240190130 FOXA1 JASPAR yes 82223722
chr2 240190116 240190122 JUN TRANSFAC yes 82223723
chr2 240190116 240190127 FOXB1 JASPAR yes 82223724
chr2 240190116 240190127 FOXC1 JASPAR yes 82223725
chr2 240190116 240190128 FOXC2 JASPAR yes 82223726
Genes associated with rs573848885[chr2:240190118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More