EnhancerDB
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  3. rs573971727[chr6:43057753]
Enhancers that have rs573971727[chr6:43057753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43045645 43067063 enh23249
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573971727[chr6:43057753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43057740 43057753 TFAP2A JASPAR yes 101752529
chr6 43057740 43057753 TFAP2B JASPAR yes 101752530
chr6 43057740 43057753 TFAP2C JASPAR yes 101752531
chr6 43057743 43058367 TCF7L2 UCSC Txn Factor no Conserved 108540289
chr6 43057747 43057762 HNF4A JASPAR yes 101752532
chr6 43057748 43057762 NR2F1 JASPAR yes 101752533
chr6 43057748 43057763 HNF4G JASPAR yes 101752534
chr6 43057749 43057763 TCF7L2 JASPAR yes 101752535
Genes associated with rs573971727[chr6:43057753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More