EnhancerDB
  1. Home
  2. SNP
  3. rs574028533[chr17:65467242]
Enhancers that have rs574028533[chr17:65467242]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs574028533[chr17:65467242]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65467228 65467242 GATA2 JASPAR yes 55508140
chr17 65467228 65467243 FOXP1 JASPAR yes 55508141
chr17 65467229 65467243 FOXF2 JASPAR yes 55508143
chr17 65467233 65467251 MAFF JASPAR yes 55508147
chr17 65467235 65467246 NRL JASPAR yes 55508148
chr17 65467235 65467250 MAFK JASPAR yes 55508149
chr17 65467238 65467251 NR2F1 JASPAR yes 55508150
chr17 65467241 65467249 NR4A2 JASPAR yes 55508151
Genes associated with rs574028533[chr17:65467242], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More