EnhancerDB
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  3. rs574040254[chr3:150062114]
Enhancers that have rs574040254[chr3:150062114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150057777 150071992 enh21028
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574040254[chr3:150062114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150062100 150062115 TFAP2A JASPAR yes 6565342
chr3 150062102 150062115 TFAP2A JASPAR yes 6565343
chr3 150062102 150062115 TFAP2B JASPAR yes 6565344
chr3 150062102 150062115 TFAP2C JASPAR yes 6565345
chr3 150062102 150062117 TFAP2A JASPAR yes 6565346
Genes associated with rs574040254[chr3:150062114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More