EnhancerDB
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  3. rs574042792[chr17:56029575]
Enhancers that have rs574042792[chr17:56029575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574042792[chr17:56029575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56029572 56029576 YY1 TRANSFAC yes 55004155
chr17 56029573 56029588 FOXA1 JASPAR yes 55004156
chr17 56029574 56029586 FOXI1 JASPAR yes 55004157
chr17 56029574 56029588 POU4F1 JASPAR yes 55004158
chr17 56029574 56029589 FOXP1 JASPAR yes 55004159
chr17 56029574 56029589 HNF1A JASPAR yes 55004160
chr17 56029575 56029587 FOXC2 JASPAR yes 55004161
chr17 56029575 56029589 ONECUT2 JASPAR yes 55004162
chr17 56029575 56029589 ONECUT3 JASPAR yes 55004163
Genes associated with rs574042792[chr17:56029575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More