EnhancerDB
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  3. rs574090913[chr17:55995219]
Enhancers that have rs574090913[chr17:55995219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574090913[chr17:55995219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55995206 55995223 RXRA JASPAR yes 54999054
chr17 55995208 55995229 ZNF263 JASPAR yes 54999055
chr17 55995216 55995227 FOSL2 JASPAR yes 54999056
chr17 55995219 55995229 SP1 JASPAR yes 54999057
Genes associated with rs574090913[chr17:55995219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More