EnhancerDB
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  3. rs574109665[chr17:46081120]
Enhancers that have rs574109665[chr17:46081120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574109665[chr17:46081120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267670
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267671
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267672
chr17 46080354 46081237 ZNF274 GTRD no Liver (HepG2) 108267723
chr17 46080375 46081147 ZNF274 GTRD no Liver (HepG2) 108267724
chr17 46080442 46081251 TEF1 GTRD no Bone (Osteoblast) 21767391
chr17 46080442 46081251 TEF1 GTRD no Bone (Osteoblast) 108267726
chr17 46080590 46081277 ZNF274 GTRD no Bone Marrow (K562) 108267728
chr17 46080600 46081179 ZNF274 GTRD no Bone Marrow (K562) 108267729
chr17 46080646 46081142 ZNF274 GTRD no Liver (HepG2) 108267730
chr17 46080659 46081194 ZBTB33 GTRD no Lung (A549) 108267731
chr17 46080706 46081159 ZNF274 GTRD no Cervix (HeLa-S3) 21767393
chr17 46080706 46081159 ZNF274 GTRD no Cervix (HeLa-S3) 108267732
chr17 46080717 46081417 ZNF274 GTRD no Liver (HepG2) 108267735
chr17 46080724 46081394 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767395
chr17 46080724 46081394 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267736
chr17 46080805 46081474 ZNF274 GTRD no Bone Marrow (K562) 108267739
chr17 46080829 46081153 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767397
chr17 46080829 46081153 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267740
chr17 46080842 46081384 ZNF274 GTRD no Liver (HepG2) 108267741
chr17 46080861 46081467 ZNF274 GTRD no Liver (HepG2) 108267742
chr17 46081113 46081124 HOXA10 JASPAR yes 54551806
chr17 46081114 46081124 ALX3 JASPAR yes 54551807
chr17 46081114 46081124 GSX1 JASPAR yes 54551808
chr17 46081114 46081124 GSX2 JASPAR yes 54551809
chr17 46081114 46081124 HOXB2 JASPAR yes 54551810
chr17 46081114 46081124 HOXB3 JASPAR yes 54551811
chr17 46081114 46081124 MEOX2 JASPAR yes 54551812
chr17 46081114 46081124 MIXL1 JASPAR yes 54551813
chr17 46081114 46081124 MNX1 JASPAR yes 54551814
chr17 46081115 46081123 LMX1A JASPAR yes 54551815
chr17 46081115 46081123 LMX1B JASPAR yes 54551816
chr17 46081115 46081123 NKX6-1 JASPAR yes 54551817
chr17 46081115 46081123 NKX6-2 JASPAR yes 54551818
chr17 46081115 46081123 PDX1 JASPAR yes 54551819
chr17 46081115 46081123 VAX1 JASPAR yes 54551820
chr17 46081115 46081123 VAX2 JASPAR yes 54551821
chr17 46081115 46081123 VSX1 JASPAR yes 54551822
chr17 46081116 46081127 PHOX2A JASPAR yes 54551823
Genes associated with rs574109665[chr17:46081120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More