EnhancerDB
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  3. rs574201104[chr5:173198799]
Enhancers that have rs574201104[chr5:173198799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574201104[chr5:173198799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173198797 173198801 YY1 TRANSFAC yes 67902977
chr5 173198799 173198809 HOXB13 JASPAR yes 67902978
chr5 173198799 173198809 HOXD13 JASPAR yes 67902979
chr5 173198799 173198810 HOXA10 JASPAR yes 67902980
Genes associated with rs574201104[chr5:173198799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More