EnhancerDB
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  3. rs574253642[chr16:29153734]
Enhancers that have rs574253642[chr16:29153734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs574253642[chr16:29153734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29153731 29153746 FOXP1 JASPAR yes 10244408
chr16 29153732 29153747 FOXP1 JASPAR yes 10244409
chr16 29153733 29153739 TBP TRANSFAC yes 10244410
chr16 29153733 29153748 FOXP1 JASPAR yes 10244411
chr16 29153734 29153749 FOXP1 JASPAR yes 10244412
chr16 29153734 29153755 IRF1 JASPAR yes 10244413
Genes associated with rs574253642[chr16:29153734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More