EnhancerDB
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  3. rs574299333[chr1:19777153]
Enhancers that have rs574299333[chr1:19777153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574299333[chr1:19777153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19777137 19777155 ESR1 JASPAR yes 27192009
chr1 19777152 19777161 ZEB1 JASPAR yes 27192010
chr1 19777153 19777166 NFKB1 JASPAR yes 27192011
Genes associated with rs574299333[chr1:19777153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More