EnhancerDB
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  3. rs574346567[chr19:5951672]
Enhancers that have rs574346567[chr19:5951672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574346567[chr19:5951672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5951661 5951672 FLI1 JASPAR yes 112247213
chr19 5951667 5951673 SP1 TRANSFAC yes 112247215
chr19 5951667 5951684 RARA JASPAR yes 112247216
chr19 5951667 5951684 RXRA JASPAR yes 112247217
chr19 5951668 5951673 SP1 TRANSFAC yes 112247218
chr19 5951669 5951674 SP1 TRANSFAC yes 112247219
chr19 5951669 5951678 THAP1 JASPAR yes 112247220
chr19 5951669 5951684 NR2C2 JASPAR yes 112247221
chr19 5951672 5951676 LFA1 TRANSFAC yes 112247222
chr19 5951672 5951684 INSM1 JASPAR yes 112247223
Genes associated with rs574346567[chr19:5951672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More