EnhancerDB
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  3. rs574373966[chr17:57836059]
Enhancers that have rs574373966[chr17:57836059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs574373966[chr17:57836059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57832261 57836729 ZNF143 GTRD no Epithelial (MCF-7) 21775326
chr17 57832261 57836729 ZNF143 GTRD no Epithelial (MCF-7) 108276469
chr17 57832261 57836729 ZNF143 GTRD no Epithelial (MCF-7) 108276470
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 21775327
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276471
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276472
chr17 57832296 57837977 ZNF143 GTRD no Epithelial (MCF-7) 108276473
chr17 57832536 57836677 ZNF143 GTRD no Epithelial (MCF-7) 21775333
chr17 57832536 57836677 ZNF143 GTRD no Epithelial (MCF-7) 108276480
chr17 57833062 57836110 ZNF143 GTRD no Epithelial (MCF-7) 21775378
chr17 57833062 57836110 ZNF143 GTRD no Epithelial (MCF-7) 108276538
chr17 57833252 57836201 ZNF143 GTRD no Epithelial (MCF-7) 21775397
chr17 57833252 57836201 ZNF143 GTRD no Epithelial (MCF-7) 108276567
chr17 57833292 57836124 ZNF143 GTRD no Epithelial (MCF-7) 21775405
chr17 57833292 57836124 ZNF143 GTRD no Epithelial (MCF-7) 108276579
chr17 57836052 57836063 NRF1 JASPAR yes 55078243
chr17 57836053 57836073 TP63 JASPAR yes 55078244
chr17 57836056 57836069 SMAD2 JASPAR yes 55078245
chr17 57836059 57836069 TBR1 JASPAR yes 55078246
Genes associated with rs574373966[chr17:57836059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More