EnhancerDB
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  3. rs574400456[chr5:171847730]
Enhancers that have rs574400456[chr5:171847730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171823725 171849015 enh22806
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 171847636 171847998 vista50146
VISTA
Transcript factors that have rs574400456[chr5:171847730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171847254 171847935 STAT3 UCSC Txn Factor no Conserved 108537454
chr5 171847504 171847885 NFYA UCSC Txn Factor no Conserved 108537455
chr5 171847530 171847893 NFYB UCSC Txn Factor no Conserved 108537456
chr5 171847538 171847935 GABPA UCSC Txn Factor no Conserved 108537457
chr5 171847541 171847897 CHD2 UCSC Txn Factor no Conserved 108537458
chr5 171847545 171847777 FOXA1 UCSC Txn Factor no Conserved 108537459
chr5 171847604 171847864 IRF3 UCSC Txn Factor no Conserved 108537460
chr5 171847636 171847818 PBX3 UCSC Txn Factor no Conserved 108537461
chr5 171847671 171847995 CEBPB UCSC Txn Factor no Conserved 108537462
chr5 171847719 171847730 BATF JASPAR yes 67787990
chr5 171847719 171847730 BATF JASPAR yes 70761661
chr5 171847724 171847738 ONECUT1 JASPAR yes 67787991
chr5 171847724 171847738 ONECUT1 JASPAR yes 70761662
chr5 171847725 171847735 CUX1 JASPAR yes 67787992
chr5 171847725 171847735 CUX1 JASPAR yes 70761663
chr5 171847727 171847739 PBX1 JASPAR yes 67787993
chr5 171847727 171847739 PBX1 JASPAR yes 70761664
chr5 171847730 171847735 NFY TRANSFAC yes 67787994
chr5 171847730 171847735 NFY TRANSFAC yes 70761665
Genes associated with rs574400456[chr5:171847730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More