EnhancerDB
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  3. rs574470361[chr12:125188723]
Enhancers that have rs574470361[chr12:125188723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125188436 125188747 vista15322
VISTA
Transcript factors that have rs574470361[chr12:125188723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125188009 125189194 AR GTRD no Prostate (PC-3) 21582083
chr12 125188009 125189194 AR GTRD no Prostate (PC-3) 108069534
chr12 125188435 125188939 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582086
chr12 125188435 125188939 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069537
chr12 125188436 125188818 TCF7L2 GTRD no Colon (HCT116) 21582087
chr12 125188436 125188818 TCF7L2 GTRD no Colon (HCT116) 108069538
chr12 125188445 125188785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582088
chr12 125188445 125188785 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069539
chr12 125188448 125188724 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582089
chr12 125188448 125188724 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069540
chr12 125188460 125188777 TCF7L2 GTRD no Colon (HCT116) 21582090
chr12 125188460 125188777 TCF7L2 GTRD no Colon (HCT116) 108069541
chr12 125188472 125188781 SOX2 GTRD no Neural Stem Cells (H9) 21582091
chr12 125188472 125188781 SOX2 GTRD no Neural Stem Cells (H9) 108069542
chr12 125188491 125188759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582092
chr12 125188491 125188759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069543
chr12 125188491 125188791 CEBPB UCSC Txn Factor no Conserved 108069544
chr12 125188523 125188747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582093
chr12 125188523 125188747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108069545
chr12 125188530 125188926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582094
chr12 125188530 125188926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069546
chr12 125188546 125188819 SOX2 GTRD no Neural Stem Cells (H9) 21582095
chr12 125188546 125188819 SOX2 GTRD no Neural Stem Cells (H9) 108069547
chr12 125188561 125188802 SOX2 GTRD no Neural Stem Cells (H9) 21582096
chr12 125188561 125188802 SOX2 GTRD no Neural Stem Cells (H9) 108069548
chr12 125188580 125188870 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582097
chr12 125188580 125188870 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069549
chr12 125188716 125188727 USF2 JASPAR yes 82497412
chr12 125188716 125188727 USF2 JASPAR yes 124411066
chr12 125188717 125188727 TFEB JASPAR yes 82497413
chr12 125188717 125188727 TFEC JASPAR yes 82497414
chr12 125188717 125188727 TFEB JASPAR yes 124411067
chr12 125188717 125188727 TFEC JASPAR yes 124411068
chr12 125188717 125188728 USF1 JASPAR yes 82497415
chr12 125188717 125188728 USF1 JASPAR yes 124411069
chr12 125188720 125188738 RARA JASPAR yes 82497416
chr12 125188720 125188738 RARA JASPAR yes 124411070
Genes associated with rs574470361[chr12:125188723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More