EnhancerDB
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  3. rs574541052[chr6:16683996]
Enhancers that have rs574541052[chr6:16683996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574541052[chr6:16683996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16683875 16684391 TFAP2C UCSC Txn Factor no Conserved 108538894
chr6 16683985 16684000 STAT1 JASPAR yes 100326922
chr6 16683987 16683998 STAT1 JASPAR yes 100326923
chr6 16683987 16683998 STAT3 JASPAR yes 100326924
Genes associated with rs574541052[chr6:16683996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More