EnhancerDB
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  3. rs574549688[chr1:117396401]
Enhancers that have rs574549688[chr1:117396401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs574549688[chr1:117396401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117395974 117396412 ZNF143 GTRD no Epithelial (MCF-7) 21333945
chr1 117395989 117396522 ZNF143 GTRD no Epithelial (MCF-7) 21333946
chr1 117396032 117397595 ZNF143 GTRD no Epithelial (MCF-7) 21333947
chr1 117396179 117396749 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333948
chr1 117396187 117396837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333949
chr1 117396208 117396664 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333950
chr1 117396241 117396641 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333951
chr1 117396246 117396642 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333952
chr1 117396274 117396744 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333953
chr1 117396295 117396579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333954
chr1 117396304 117396584 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333955
chr1 117396306 117396662 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333956
chr1 117396309 117396565 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333957
chr1 117396341 117396571 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333958
chr1 117396379 117396949 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333959
Genes associated with rs574549688[chr1:117396401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More