EnhancerDB
  1. Home
  2. SNP
  3. rs574599475[chr16:88844042]
Enhancers that have rs574599475[chr16:88844042]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574599475[chr16:88844042]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88844035 88844045 HOXC10 JASPAR yes 12303313
chr16 88844037 88844047 POU6F2 JASPAR yes 12303314
chr16 88844038 88844052 CREB3L1 JASPAR yes 12303315
chr16 88844039 88844053 XBP1 JASPAR yes 12303316
Genes associated with rs574599475[chr16:88844042], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More