EnhancerDB
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  3. rs574616158[chr17:48967588]
Enhancers that have rs574616158[chr17:48967588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs574616158[chr17:48967588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48967328 48968125 TCF7L2 GTRD no Colon (HCT116) 21770279
chr17 48967573 48967588 MEF2C JASPAR yes 54729642
chr17 48967574 48967589 MEF2A JASPAR yes 54729643
chr17 48967578 48967592 SPIC JASPAR yes 54729651
Genes associated with rs574616158[chr17:48967588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More