EnhancerDB
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  3. rs574629823[chr12:94176269]
Enhancers that have rs574629823[chr12:94176269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 94163885 94183295 enh14903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574629823[chr12:94176269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 94171213 94176821 ZNF274 GTRD no Blood (GM12878) 108051455
chr12 94171459 94176766 ZNF274 GTRD no Blood (GM12878) 108051459
chr12 94171495 94177040 ZNF274 GTRD no Blood (GM12878) 108051462
chr12 94171746 94176839 ZNF274 GTRD no Blood (GM12878) 108051463
chr12 94171908 94176800 ZNF274 GTRD no Blood (GM12878) 108051466
chr12 94176262 94176272 ALX3 JASPAR yes 122882091
chr12 94176262 94176272 GSX2 JASPAR yes 122882092
chr12 94176262 94176272 MNX1 JASPAR yes 122882093
chr12 94176262 94176273 HOXA10 JASPAR yes 122882094
chr12 94176263 94176271 LMX1A JASPAR yes 122882095
chr12 94176263 94176271 LMX1B JASPAR yes 122882096
chr12 94176263 94176271 NKX6-1 JASPAR yes 122882097
chr12 94176263 94176271 NKX6-2 JASPAR yes 122882098
chr12 94176263 94176271 VAX1 JASPAR yes 122882099
chr12 94176263 94176271 VAX2 JASPAR yes 122882100
chr12 94176263 94176271 VSX1 JASPAR yes 122882101
chr12 94176263 94176271 VSX2 JASPAR yes 122882102
chr12 94176267 94176282 FOXP1 JASPAR yes 122882103
chr12 94176268 94176274 TBP TRANSFAC yes 122882104
chr12 94176268 94176289 IRF1 JASPAR yes 122882105
chr12 94176269 94176281 FOXC2 JASPAR yes 122882106
Genes associated with rs574629823[chr12:94176269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More